Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015890927.1_cds_XP_016445626.1_40571
CDS Infomation	[gene=LOC107770809] [db_xref=GeneID:107770809] [protein=soluble starch synthase 3, chloroplastic/amyloplastic-like] [protein_id=XP_016445626.1] [location=join(61715..61843,62501..62558,62653..64242,65553..65767,65908..66178,68220..68395,69083..69190,69585..69694,71315..71420,72329..72499,73020..73148,75383..75565,75886..76017,76102..76213,77101..77224,79289..79424)] [gbkey=CDS]
Sequence	ATGGATGTTCCATTGCCACTGCAAAGACCATTGAGTTACAGCAATAGTGTCTCCACTGAA AGAACCCACCTCAACATCAAACCTTTTCTTGGTTTTGTCCCTCATGGAACCACATGTCTA TCCGTACAATCTTCTTCGTGGAGGAACGATGGAATGGTTGCTGGAGTTTCATATCCATTT TGTGCAAATTTCTCCAGAAGAAGACAGAGAAAACTTTCAACTCCTAGGAGTCAAGGCTCT TCACCAAAGGGGTTTGTGCCAAGGACGCCTTCAGGGATGAGCACACAAAGAAGGGATCAG AAGAGCAACGGTGATAAAGAAAGTCAAAGTACTTCATCATCCAAAGAATCAGAAATTTCC AACCCCAAGACGTTTGAAGCAAAAGTTGAAACTAGTGATGATGGCACTAAACAAGTGGGA AGGGACCGCAAGTCTCAGGAGGAGGAGGATGAATTCAATGGTGCCACTAAATCAGTAAGT CTATCACCTGTTCGTGGATCAACTCAATTTGTTGGAAGTGGAGAAACTGGTGACAATGAC GTGGGTGCTGTAAATTTTAATAAATCAAATAGAACGGAAGAGAGTGATTTTCAAATTGAT TCTGTAATAAGAGAACAAAGTGGAGGTGATTACTCCGAAAATATTCAGGGGAAAACTAGC AAGGGCAGCCTCGCTTTGGGTACACCACTTTCTGAAATATTGCAGCTAGATATTGATGGA GGTTATAAAGTTGAACAATACAATCATGATGAGTTGGATGAGACACAAAAACTGAAAGAA AATGATGCTGGGAATGTTGAAGACAAAAGACCCTTAGCAAGAGAGCTGTTGGAAATGACT AAGCCTAGCAATGTGGAATTTACTGAAAGCAATGAGATCACTGAAGTAGACAGTAATAGT TTCTTAAAACCAGATTCAGTTGACGAGAGTGAGCCATCAACTGTAGGAACATTAGAGACT GAAGATATTTCTCTGAAGTTAAGATTGGAGATGGAAGCGAATCTACGTAGGCAGGCTATA AAAAGGCTTGCCGAGGAAAATTTATTGCAAGGAATCAGATTATTTTGTTTCCCAGAGGTT GTAAAACCCAATGAAGATGTCGAAATATTCCTTAACAGGAGTCTTTCCACTTTGAATAAT GAACCTGATCTCTTGATTATGGGAGCTTTTAATGACTGGCGGTGGAGATCTTTTACTACA ACACTAACTGAGACTCATCTCAGTGGAGATTGGTGGTCTTGCAAGATCCACGTTCCGAAG GAAGCATACAAGATTGATTTTGTGTTTTTTAATGGAAAGGATGTCTATGACAACAATGAT AATAATGATTTCAGTATAACTGTGGAAGGTGGTATGCAAATTCTTGATTTTGAAAATTTC TTGCTCGAGGAGAAACGGAGAGAACAGGAGAAACTTGCTAAAGAACAAGCTGAAAGAGAA AGACTAGCAGAAGAACAAAGGCGAATAGAAGCAGAGAAAGCTGCACTTGAAGCTGATAGA TCACAGGCAAAGGAAGAGGCTGCAAAGAAAAGGGAAGTATTGCAAGCACTGATGGCAAAA GCCTCGAAGACTCGTGATATCACCTGGTATATCGAACCAAGTGTATTTAAATGTGAGGAG AAGGTCAAGTTATACTATGACAAAAGTTCAGGTCCTCTCTCCCATGCTAAGGACTTGTGG ATCCATGGAGGATATAACAACTGGAAGGATGGTTTGTCTATCGTTGAAAAGCTTGTTAAA TCTGAGAGAATAGATGGTGATTGGTGGTATACAGAGGTTGTCATCCCTGATCGGGCACTT GTCTTGGATTGGGTTTTTGCTGATGGTCCACCCAAGCATGCCATTGCATATGATAACAAT CATCGCCAAGACTTCCATGCCATTGTCCCCAAGCACATTCCGGAGGAATTATATTGGGTT GAGGAAGAACTTCAGATCTTCAAGACACTTCAGGAGGAGAGAAGGCTTAGAGAAGAGGCT ATGCGTGCTAAGGCTGAAAAAGCAGCACGTATGAAAGCTGAAACAAAGGAAAGGACTATG AAATCATTCTTATTGTCTCAGAAGCATATAGTGTACACTGAGCCTCTTGATGTCCAAGCT GGAAGCAGCGTCACAGTTTACTATAATCCCGCCAATACAGTACTTAATGGTAAACCTGAA ATTTGGTTCAGATGTTCATTCAATCGTTGGACTCACCGCCTGGGTCCATTGCCGCCTCAA AAAATGTTGCCTACTGAAAATGGAACCCATGTCAAAGCAACTGTGAAGGTTCCATTGGAT GCACATATGATGGATTTTGTATTCTCTGAGAGAGAAGATGGTGGAATTTTTGACAATAGA AGTGGAATGGACTATCACATACCTGTGTTTGGAGGAGTCGCAAAAGAACCTCCGATGCAT ATTGTTCATATTGCTGTCGAAATGGCACCTATTGCAAAGGTGGGAGGCCTTGGTGATGTT GTTACTAGTCTTTCCCGTGCAGTTCAAGATTTAAACCATAATGTGGATATCATCTTACCT AAGTATGACTGTTTGAAGATGAATCAGGTGAAGGACTTTCAGTTTCACAAAAGCTACTTT TGGGGTGGGACTGAAATAAAAGTATGGTTTGGGAAGGTGGAAGGTGTCTCCGTCTACTTT TTGGAGCCTCAAAACGGGTTATTTTGGAAGGGGTGTGTATATGGTTGTAATAATGATGGT GAAAGATTTGGTTTCTTTTGTCACGCGGCTTTGGAGTTTCTTCTGCAAGGTGGATTTCAT CCGGATATCATCCATTGCCATGATTGGTCTAGTGCTCCCGTTGCGTGGCTCTTTAAGGAA CAATATACACACTATGGTCTAAGCAAGTCTCGAATTGTCTTCACAATACACAATCTTGAA TTTGGTGCAGATCTCATTGGGAAAGCAATGACTTATGCAGACAAAGCTACAACAGTTTCC CCAACTTACTCAAGGGAGGTGTCTGGAAACCCTGTAATTGCACCTCACCTTTACAAGTTC CATGGTATAGTGAACGGGATTGACCCAGATATTTGGGACCCGTTGAACGATAAGTTCATT CCGATTTCATACACCTCGGAAAATGTTGTTGAAGGCAAAACAGCAGCCAAGGAAGCTTTG CAGCAAAAACTTGGACTGAAACAGGCCGACCTTCCTTTGGTAGGAATAATCACCCGCTTA ACTCACCAGAAAGGAATCCACCTCATCAAACATGCTATTTGGCGCACCCTGGAACGGAAT GGACAGGTGGTCTTGCTTGGTTCTGCTCCTGATCCTAGGATACAAAATGATTTTGTTAAT TTGGCAAATCAATTGCACTCCACATATAATGACCGTGCACGGCTCTGTCTAACATACGAT GAGCCACTTTCTCACCTGATATATGCTGGTGCTGATTTCATTCTAGTCCCTTCAATATTT GAGCCATGTGGACTAACACAACTTACGGCGATGAGATATGGTTCAATTCCAATTGTGCGT AAAACTGGAGGACTTTATGATACTGTATTTGATGTTGACCATGACAAAGAGAGAGCACAA CAGTGTGGTCTTGAACCAAATGGATTCAGCTTTGATGGAGCTGATGCTGCCGGAGTTGAT TATGCTCTGAATAGAGCTCTGTCTGCTTGGTATGATGGTCGGGATTGGTTCAACTCTTTA TGCAAGCAGGTCATGGAACAAGATTGGTCTTGGAACCGACCTGCTCTTGATTATTTGGAG CTTTACCATGCTGCTAGAAAGTTAGAATAG

Peptide Sequence

PEP ID	XP_016445626.1
PEP Infomation	PREDICTED: soluble starch synthase 3, chloroplastic/amyloplastic-like [Nicotiana tabacum]
Sequence	MDVPLPLQRPLSYSNSVSTERTHLNIKPFLGFVPHGTTCLSVQSSSWRNDGMVAGVSYPF CANFSRRRQRKLSTPRSQGSSPKGFVPRTPSGMSTQRRDQKSNGDKESQSTSSSKESEIS NPKTFEAKVETSDDGTKQVGRDRKSQEEEDEFNGATKSVSLSPVRGSTQFVGSGETGDND VGAVNFNKSNRTEESDFQIDSVIREQSGGDYSENIQGKTSKGSLALGTPLSEILQLDIDG GYKVEQYNHDELDETQKLKENDAGNVEDKRPLARELLEMTKPSNVEFTESNEITEVDSNS FLKPDSVDESEPSTVGTLETEDISLKLRLEMEANLRRQAIKRLAEENLLQGIRLFCFPEV VKPNEDVEIFLNRSLSTLNNEPDLLIMGAFNDWRWRSFTTTLTETHLSGDWWSCKIHVPK EAYKIDFVFFNGKDVYDNNDNNDFSITVEGGMQILDFENFLLEEKRREQEKLAKEQAERE RLAEEQRRIEAEKAALEADRSQAKEEAAKKREVLQALMAKASKTRDITWYIEPSVFKCEE KVKLYYDKSSGPLSHAKDLWIHGGYNNWKDGLSIVEKLVKSERIDGDWWYTEVVIPDRAL VLDWVFADGPPKHAIAYDNNHRQDFHAIVPKHIPEELYWVEEELQIFKTLQEERRLREEA MRAKAEKAARMKAETKERTMKSFLLSQKHIVYTEPLDVQAGSSVTVYYNPANTVLNGKPE IWFRCSFNRWTHRLGPLPPQKMLPTENGTHVKATVKVPLDAHMMDFVFSEREDGGIFDNR SGMDYHIPVFGGVAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILP KYDCLKMNQVKDFQFHKSYFWGGTEIKVWFGKVEGVSVYFLEPQNGLFWKGCVYGCNNDG ERFGFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLE FGADLIGKAMTYADKATTVSPTYSREVSGNPVIAPHLYKFHGIVNGIDPDIWDPLNDKFI PISYTSENVVEGKTAAKEALQQKLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERN GQVVLLGSAPDPRIQNDFVNLANQLHSTYNDRARLCLTYDEPLSHLIYAGADFILVPSIF EPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAAGVD YALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLELYHAARKLE

Transcript Sequence

Gene sequence data has not been registered.